Raw file	Enzyme	Enzyme mode	Enzyme first search	Enzyme mode first search	Use enzyme first search	Variable modifications	Variable modifications first search	Use variable modifications first search	Multiplicity	Max. missed cleavages	Max. labeled AAs	Labels0	Labels1	Labels2	LC-MS run type	Time-dependent recalibration	MS	MS/MS	MS/MS Submitted	MS/MS Submitted (SIL)	MS/MS Submitted (ISO)	MS/MS Submitted (PEAK)	MS/MS Identified	MS/MS Identified (SIL)	MS/MS Identified (ISO)	MS/MS Identified (PEAK)	MS/MS Identified [%]	MS/MS Identified (SIL) [%]	MS/MS Identified (ISO) [%]	MS/MS Identified (PEAK) [%]	Peptide Sequences Identified	Peaks	Peaks Sequenced	Peaks Sequenced [%]	Peaks Repeatedly Sequenced	Peaks Repeatedly Sequenced [%]	Isotope Patterns	Isotope Patterns Sequenced	Isotope Patterns Sequenced (z>1)	Isotope Patterns Sequenced [%]	Isotope Patterns Sequenced (z>1) [%]	Isotope Patterns Repeatedly Sequenced	Isotope Patterns Repeatedly Sequenced [%]	Multiplets	Multiplets z=1	Multiplets z=2	Multiplets z=3	Multiplets z=4	Multiplets z=5	Multiplets z=6	Multiplets Sequenced	Multiplets Sequenced [%]	Multiplets Repeatedly Sequenced	Multiplets Repeatedly Sequenced [%]	Multiplets Identified	Multiplets Identified [%]	Recalibrated	Av. Absolute Mass Deviation [ppm]	Mass Standard Deviation [ppm]	Av. Absolute Mass Deviation [mDa]	Mass Standard Deviation [mDa]	Label free norm param
SET1- 2A- NON LINEAR-1	Trypsin	Specific			False	Oxidation (M);BONCAT;Deamidation (NQ);Leucine(label);Met->aha(tag);Met->aha(tagMCL)		False	3	1	3	arg(norm);Lysine(norm)	Arg6;Lys6	Arg10;Lys8	Standard		8502	144696	203141	680	85489	116972	12282	111	10374	1797	6.05	16.32	12.13	1.54	1192	2308732	52801	2.29	26088	49.41	168359	20581	17862	12.22	15.65	13849	67.29	220	122	57	34	5	1	1	81	36.82	71	87.65	16	19.75	+	1.8852	2.7031	20598	49497	
Total																	8502	144696	203141	680	85489	116972	12282	111	10374	1797	6.05	16.32	12.13	1.54	1192	2308732					168359	20581	17862	12.22	15.65	13849	67.29	220	122	57	34	5	1	1	81	36.82	71	87.65	16	19.75		1.8852	2.7031	20598	49497	
